Help:References/EndNote - Revision history

Harry Brumer at 13:06, 27 May 2011

2011-05-27T13:06:50Z

Harry Brumer at 07:22, 19 May 2010

2010-05-19T07:22:45Z

Harry Brumer: Created page with 'It is anticipated that many ''CAZypedia'' editors will be regular users of the reference management software [http://en.wikipedia.org/wiki/EndNote EndNote]. '''EndNote''' can be…'

2010-02-22T11:32:33Z

Created page with 'It is anticipated that many ''CAZypedia'' editors will be regular users of the reference management software [http://en.wikipedia.org/wiki/EndNote EndNote]. '''EndNote''' can be…'

New page

It is anticipated that many ''CAZypedia'' editors will be regular users of the reference management software [http://en.wikipedia.org/wiki/EndNote EndNote]. '''EndNote''' can be used to both insert the in-text citations (e.g. ''<nowiki><cite>REF1</cite></nowiki>'' and format content to go in the ''<nowiki><biblio>...</bibilo></nowiki>'' tags.

''The following is a step-by-step guide to using '''EndNote''' with '''MS Word''' in '''Windows''' to format text to cut and paste into ''CAZypedia''.''

{| {{Prettytable}}
|
# Download the [[CAZypedia]] '''EndNote''' style, ''CAZypedia.ens'', from this link (http://www.biotech.kth.se/cazypedia/CAZypedia.ens) and save the file in your EndNote styles folder (e.g. C:\Program Files\EndNote 9\Styles).
# Write your CAZypedia entry in '''MS Word''', inserting references via '''EndNote''' as usual.
# Format your entry using the '''CAZypedia style''' ('''CAZypedia.ens''')
#* ''Note that all references in the bibliography will now start with "#'''N''', where '''N''' is the reference number and that these numbers will be referenced in the text with <nowiki><cite></nowiki>'''N'''<nowiki></cite></nowiki>.''
# Save your Word file with an informative field name such as ''CAZypediaText.doc''
# Select all of your text + references by pressing '''Ctrl+A''' (Windows)
# With everything selected, press '''Ctrl+6''' to remove all EndNote "field codes."
# Save this version as a Word new file, e.g. ''CAZypediaText_NoFields.doc''
# Copy and paste your main text into a CAZypedia page edit window.
# Copy and paste your bibliography under a heading titled '''References'''.
# Add the tag ''<nowiki><biblio></nowiki>'' before the bibliography.
# Add the tag ''<nowiki></biblio></nowiki>'' after the bibliography.
# Preview and save your entry.
|}

''This procedure will work best when writing a page from scratch. Be very careful when adding text to a page that reference codes are not used more than once <u>in the bibliography</u>. (You can cite a reference as much as you like in the text.)''

== Using EndNote to format references with PubMed IDs and ISBNs ==
''It should be possible to combine the above two methods for building a bibliography and referencing it in the text. This would require:''

* PubMed IDs or ISBNs must be added in fields in your EndNote records.
* The CAZypedia EndNote style must be altered to output bibliographic records in the format "#refN pmid=nnnnnnn" and "#refN isbn=yyyyyyyyyy"

''Since this depends on how ''CAZypedia'' editors add PubMed IDs and ISBNs to their EndNote libraries, no general solution can be given.''

← Older revision		Revision as of 13:06, 27 May 2011
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		+	As described on the [http://openwetware.org/wiki/Wikiomics:Biblio Biblio home page], it is in fact possible to use the reference software program EndNote to format references in a ''CAZypedia'' page. '''However, this method is not generally recommended, as it is rather complicated.'''
		+
		+	Furthermore, the EndNote style file referred to below should be altered to output reference tags as "#AuthorYear" not "#number". If you are really keen to use EndNote, please contact the [[Board of Curators\|Primary Curator]] before beginning work. Otherwise, the following instructions have been kept here as a matter of record.
		+
		+
		+	== Using EndNote for formatting references in ''CAZypedia'' ==
	It is anticipated that many ''CAZypedia'' editors will be regular users of the reference management software [http://en.wikipedia.org/wiki/EndNote EndNote]. '''EndNote''' can be used to both insert the in-text citations (e.g. ''<nowiki><cite>REF1</cite></nowiki>'' and format content to go in the ''<nowiki><biblio>...</bibilo></nowiki>'' tags.		It is anticipated that many ''CAZypedia'' editors will be regular users of the reference management software [http://en.wikipedia.org/wiki/EndNote EndNote]. '''EndNote''' can be used to both insert the in-text citations (e.g. ''<nowiki><cite>REF1</cite></nowiki>'' and format content to go in the ''<nowiki><biblio>...</bibilo></nowiki>'' tags.

@@ Line 5: / Line 5: @@
 {| {{Prettytable}}
+|
-# Download the [[CAZypedia]] '''EndNote''' style, ''CAZypedia.ens'', from this link (http://www.biotech.kth.se/cazypedia/CAZypedia.ens) and save the file in your EndNote styles folder (e.g. C:\Program Files\EndNote 9\Styles).
+# Download the [[CAZypedia]] '''EndNote''' style, ''CAZypedia.ens'', from this link (http://www.cazypedia.org/CAZypedia.ens) and save the file in your EndNote styles folder (e.g. C:\Program Files\EndNote 9\Styles).
 # Write your CAZypedia entry in '''MS Word''', inserting references via '''EndNote''' as usual.
 # Format your entry using the '''CAZypedia style''' ('''CAZypedia.ens''')