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Difference between revisions of "Template:News"

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'''26 May 2023''' ''A new page for a nacent family:'' [[Author]] '''[[User:Guanchen Liu|Guanchen Liu]]''' and [[Responsible Curator]] '''[[User:Yaoguang Chang|Yaoguang Chang]]''' completed the '''[[Glycoside Hydrolase Family 174]]''' page today.  '''[[GH174]]''' is a recently established family of (so far) bacterial alpha-1,3-L-fucanases, which was reported by [[User:Guanchen Liu|Guanchen Liu]], [[User:Yaoguang Chang|Yaoguang Chang]] and colleagues in April, following the characterization of a representative from the marine bacterium ''Wenyingzhuangia aestuarii''Notably, this enzyme appears to prefer sulfated fucans, and generates a highly sulfated tetrasaccharide as the main hydrolysis product.  ''Read more about this interesting enzyme and family [[GH174|here]]!''
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'''19 July 2024:''' ''Chalk-up one more for the GTs!'' The '''[[Glycosyltransferase Family 47]]''' page joined the small group of [[Curator Approved]] [[Glycosyltransferase Families]] pages in ''CAZypedia'' today. This entry was [[author]]ed by Ph.D. students '''[[User:Daniel Tehrani|Daniel Tehrani]]''' and '''[[User:Charlie Corulli|Charlie Corulli]]''', and [[Responsible Curator|Curated]] by '''[[User:Breeanna Urbanowicz|Breeanna Urbanowicz]]''' with input from '''[https://ccrc.uga.edu/team/kelley-moremen/ Kelley Moremen]'''.  Widely represented in plants, '''[[GT47]]''' members are anomer-[[inverting]] [[glycosyltransferases]], which are involved in the biosynthesis of several cell wall matrix polysaccharides.  Representatives from mammals are involved in heparin biosynthesisCorrespondingly, members of [[GH47]] have diverse substrate specificities, including the transfer of both anionic and neutral monosaccharides to polysaccharides.  ''This is a great example where two keen Ph.D. students worked with their supervisors to create a valuable page for the scientific community. We encourage others to follow their lead, on your favorite family!''
 
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'''13 April 2023''' ''The champagne is on ice:'' We are ecstatic to report that we’ve hit 50 [[Curator Approved]] ''CAZypedia'' [[Carbohydrate Binding Module Families|CBM pages]]!
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'''9 July 2024:''' ''Yet another new family of beta-1,2-glucan-active enzymes!'' Today, '''[[User:Masahiro Nakajima|Masahiro Nakajima]]''' [[Curator Approved]] the '''[[Glycoside Hydrolase Family 186]]''' page by '''[[User:Sei Motouchi|Sei Motouchi]]'''. '''[[GH186]]''' is a family of anomer-[[inverting]] enzymes from bacteria, members of which are specific for beta-1,2-glucans.  Intriguingly, although some [[GH186]] members work as classic [[glycoside hydrolases]], others perform transglycosylation by wrapping the sugar chain around in the active-site, to position the 6-OH group of a terminal glucosyl unit for direct attack.  Also notable, [[GH186]] members appear to use an extended chain of water molecules to relay acceptor deprotonation by the [[general base]] residue, ''i.e.'' a [https://en.wikipedia.org/wiki/Grotthuss_mechanism Grotthuss mechanism]. ''Check out the '''[[GH186]]''' page to learn more about these interesting enzymes, and make sure to see the [[GH189]], [[GH144]], and [[GH162]] pages from this same group.''
  
The '''[[CBM92]]''' and the '''[[CBM94]]''' page were finished within under 3 hours of one another.  Congratulations to the contributors for both of the pages: new ''CAZypedia'' contibutors '''[[User:Xuanwei Mei|Xuanwei Mei]]''' and  '''[[User:Yaoguang Chang|Yaoguang Chang]]''' for the [[CBM92]] page and longtime ''CAZypedia'' contributor '''[[User:Takatsugu Miyazaki|Takatsugu Miyazaki]]''' for the [[CBM94]] page.
 
 
Next stop: 100 [[Curator Approved]] [[Carbohydrate Binding Module Families|CBM pages]] (this may take a little while).
 
 
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'''13 April 2023, 00:20:''' ''CBM92 is red hot!:'' [[CBM92]] is one of the newer families of CBMs and it has a red hot preference for the red algal extracellular matrix polysaccharide carrageenan, a complex sulfated galactan. Author '''[[User:Xuanwei Mei|Xuanwei Mei]]''' describes the novel carrageenan-binding capacities of the biochemically characterized [[CBM92]] which can be found appended to a kappa-carrageenase produced by the marine bacterium ''Wenyingzhuangia aestuarii''.  '''[[User:Yaoguang Chang|Yaoguang Chang]]''' acted as responsible curator on the page.  ''Head on over to the '''[[CBM92]]''' page to learn more about this red hot CBM family!''
 
 
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'''12 April 2023, 21:50:''' ''CBM94, one for the books!:'' Three of the [[CBM94]] eukaryotic members have recently been characterized (mouse, silkworm and human) and are described in detail on the [[CBM94]] page which has both been authored and responsibly curated by '''[[User:Takatsugu Miyazaki|Takatsugu Miyazaki]]'''. These ''N''-acetylglucosamine-specific [[CBM94]]s are found on the C-termini of ''N''-acetylglucosaminyltransferase IVa, an enzyme involved in ''N''-glycan biosynthesis.  The [[CBM94]] members play important roles in the functionality of their cognate glycosyl transferase catalytic module which is discussed in detail on the '''[[CBM94]]''' CAZypedia page. ''See more on these remarkable eukaryotic CBMs '''[[CBM94|here]]'''!'' 
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'''2 May 2024:''' ''CBDs I to X... A major milestone!'' '''CBM families 1 to 10 are now complete!''' These are the old CBD (cellulose-binding domain) families, which used to have roman numerals as part of their nomenclature. A special thank you to all the authors and responsible curators who have contributed to this major milestone. Go have a peek at each of these old school families on their respective ''CAZypedia'' pages: '''[[CBM1]], [[CBM2]], [[CBM3]], [[CBM4]], [[CBM5]], [[CBM6]], [[CBM7]], [[CBM8]], [[CBM9]], and [[CBM10]]'''.
 
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Latest revision as of 09:56, 22 July 2024

19 July 2024: Chalk-up one more for the GTs! The Glycosyltransferase Family 47 page joined the small group of Curator Approved Glycosyltransferase Families pages in CAZypedia today. This entry was authored by Ph.D. students Daniel Tehrani and Charlie Corulli, and Curated by Breeanna Urbanowicz with input from Kelley Moremen. Widely represented in plants, GT47 members are anomer-inverting glycosyltransferases, which are involved in the biosynthesis of several cell wall matrix polysaccharides. Representatives from mammals are involved in heparin biosynthesis. Correspondingly, members of GH47 have diverse substrate specificities, including the transfer of both anionic and neutral monosaccharides to polysaccharides. This is a great example where two keen Ph.D. students worked with their supervisors to create a valuable page for the scientific community. We encourage others to follow their lead, on your favorite family!


9 July 2024: Yet another new family of beta-1,2-glucan-active enzymes! Today, Masahiro Nakajima Curator Approved the Glycoside Hydrolase Family 186 page by Sei Motouchi. GH186 is a family of anomer-inverting enzymes from bacteria, members of which are specific for beta-1,2-glucans. Intriguingly, although some GH186 members work as classic glycoside hydrolases, others perform transglycosylation by wrapping the sugar chain around in the active-site, to position the 6-OH group of a terminal glucosyl unit for direct attack. Also notable, GH186 members appear to use an extended chain of water molecules to relay acceptor deprotonation by the general base residue, i.e. a Grotthuss mechanism. Check out the GH186 page to learn more about these interesting enzymes, and make sure to see the GH189, GH144, and GH162 pages from this same group.


2 May 2024: CBDs I to X... A major milestone! CBM families 1 to 10 are now complete! These are the old CBD (cellulose-binding domain) families, which used to have roman numerals as part of their nomenclature. A special thank you to all the authors and responsible curators who have contributed to this major milestone. Go have a peek at each of these old school families on their respective CAZypedia pages: CBM1, CBM2, CBM3, CBM4, CBM5, CBM6, CBM7, CBM8, CBM9, and CBM10.