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Difference between revisions of "Template:News"

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'''22 January  2010:''' '''[[User:David Rose|David Rose]]''' has just updated the references on the '''[[Glycoside  Hydrolase Family 38|GH38 page]]''' with some recently published work on the role of cations in the active site, which gives us a good excuse to showcase this page (finished back in August 2009) here in the ''Latest News'' section. '''[[Glycoside  Hydrolase Family 38|GH38]]''' contains the Class II Golgi and lysosomal α-mannosidases involved in N-glycan processing. Thanks David!
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'''19 July 2024:''' ''Chalk-up one more for the GTs!'' The '''[[Glycosyltransferase Family 47]]''' page joined the small group of [[Curator Approved]] [[Glycosyltransferase Families]] pages in ''CAZypedia'' today. This entry was [[author]]ed by Ph.D. students '''[[User:Daniel Tehrani|Daniel Tehrani]]''' and '''[[User:Charlie Corulli|Charlie Corulli]]''', and [[Responsible Curator|Curated]] by '''[[User:Breeanna Urbanowicz|Breeanna Urbanowicz]]''' with input from '''[https://ccrc.uga.edu/team/kelley-moremen/ Kelley Moremen]'''. Widely represented in plants, '''[[GT47]]''' members are anomer-[[inverting]] [[glycosyltransferases]], which are involved in the biosynthesis of several cell wall matrix polysaccharides.  Representatives from mammals are involved in heparin biosynthesis.  Correspondingly, members of [[GH47]] have diverse substrate specificities, including the transfer of both anionic and neutral monosaccharides to polysaccharides.  ''This is a great example where two keen Ph.D. students worked with their supervisors to create a valuable page for the scientific community. We encourage others to follow their lead, on your favorite family!''
 
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'''19 January 2010:''' '''[[Glycoside Hydrolase Family 58]]''', which contains the ''E. coli'' bacteriophage tailspike endo-sialidases, has now been given [[:Category:Curator approved|Curator Approved status]] by [[author]] and [[Responsible Curator|curator]] '''[[User:Warren Wakarchuk|Warren Wakarchuk]]'''.  This is the second page by [[User:Warren Wakarchuk|Warren]], who did '''[[GH101]]''' back in the autumn of 2009.
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'''9 July 2024:''' ''Yet another new family of beta-1,2-glucan-active enzymes!'' Today, '''[[User:Masahiro Nakajima|Masahiro Nakajima]]''' [[Curator Approved]] the '''[[Glycoside Hydrolase Family 186]]''' page by '''[[User:Sei Motouchi|Sei Motouchi]]'''. '''[[GH186]]''' is a family of anomer-[[inverting]] enzymes from bacteria, members of which are specific for beta-1,2-glucansIntriguingly, although some [[GH186]] members work as classic [[glycoside hydrolases]], others perform transglycosylation by wrapping the sugar chain around in the active-site, to position the 6-OH group of a terminal glucosyl unit for direct attack.  Also notable, [[GH186]] members appear to use an extended chain of water molecules to relay acceptor deprotonation by the [[general base]] residue, ''i.e.'' a [https://en.wikipedia.org/wiki/Grotthuss_mechanism Grotthuss mechanism]. ''Check out the '''[[GH186]]''' page to learn more about these interesting enzymes, and make sure to see the [[GH189]], [[GH144]], and [[GH162]] pages from this same group.''
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'''16 January 2010:''' '''[[User:Gerlind Sulzenbacher|Gerlind Sulzenbacher]]''' has completed a ''CAZypedia'' page on the α-L-fucosidase family '''[[Glycoside Hydrolase Family 29|GH29]]''', which has just been [[:Category:Curator approved|approved]] by [[Responsible Curator]] '''[[User:Steve Withers|Steve Withers]]'''.  '''[[Glycoside Hydrolase Family 29|GH29]]''' is particularly notable as it contains human α-fucosidase A1 (FucA1), defects in which give rise to the lysosomal storage disease [http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=230000 fucosidosis].
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'''2 May 2024:''' ''CBDs I to X... A major milestone!'' '''CBM families 1 to 10 are now complete!''' These are the old CBD (cellulose-binding domain) families, which used to have roman numerals as part of their nomenclature. A special thank you to all the authors and responsible curators who have contributed to this major milestone. Go have a peek at each of these old school families on their respective ''CAZypedia'' pages: '''[[CBM1]], [[CBM2]], [[CBM3]], [[CBM4]], [[CBM5]], [[CBM6]], [[CBM7]], [[CBM8]], [[CBM9]], and [[CBM10]]'''.  
 
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'''15 January 2010:''' The '''[[Glycoside Hydrolase Family 57]]''' has now been finished and given "[[:Category:Curator approved|Curator Approved]]" status by '''[[User:Stefan Janecek|Stefan Janecek]]'''.  This is ''CAZypedia's'' second page on starch-active enzymes, following [[User:Pedro Coutinho|Pedro Coutinho's]] [[GH15]] contribution (see News, Nov. 6, 2009).
 
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'''12 January 2010:''' '''[[User:Wim Nerinckx|Wim Nerinckx]]''' has just completed the herculean task of compiling an updated table on the '''[[Syn/anti lateral protonation|orientation of the catalytic acid/base residue]]''' (''syn'' vs. ''anti'' protonation) in all GH families, where known.  Look out for a '''[[Syn/anti lateral protonation|full lexicon entry]]''' by '''[[User:Wim Nerinckx|Wim]]''' and '''[[User:Spencer Williams|Spencer Williams]]''' soon!
 
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'''11 January 2010:''' ''CAZypedia'' proudly announces our ''second'' page of the new year: '''[[User:Mirjam Czjzek|Mirjam Czjzek]]''' (Station Biologique de Roscoff, France) and '''[[User:Wim Van den Ende|Wim Van den Ende]]''' (KULeuven, Belgium) have just completed the '''[[Glycoside Hydrolase Family 32]]''' page!
 
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'''04 January 2010:''' ''CAZypedia'' proudly announces our first page of the new year:  '''[[Glycoside Hydrolase Family 92]]''' by '''[[User:Harry Gilbert|Prof. Harry Gilbert]]''', which is based on work very recently published in [http://www.nature.com/nchembio/journal/vaop/ncurrent/abs/nchembio.278.html ''Nature Chemical Biology].
 
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<small>[[:Template:OlderNews|''> older news'']]</small>
 

Revision as of 08:56, 22 July 2024

19 July 2024: Chalk-up one more for the GTs! The Glycosyltransferase Family 47 page joined the small group of Curator Approved Glycosyltransferase Families pages in CAZypedia today. This entry was authored by Ph.D. students Daniel Tehrani and Charlie Corulli, and Curated by Breeanna Urbanowicz with input from Kelley Moremen. Widely represented in plants, GT47 members are anomer-inverting glycosyltransferases, which are involved in the biosynthesis of several cell wall matrix polysaccharides. Representatives from mammals are involved in heparin biosynthesis. Correspondingly, members of GH47 have diverse substrate specificities, including the transfer of both anionic and neutral monosaccharides to polysaccharides. This is a great example where two keen Ph.D. students worked with their supervisors to create a valuable page for the scientific community. We encourage others to follow their lead, on your favorite family!


9 July 2024: Yet another new family of beta-1,2-glucan-active enzymes! Today, Masahiro Nakajima Curator Approved the Glycoside Hydrolase Family 186 page by Sei Motouchi. GH186 is a family of anomer-inverting enzymes from bacteria, members of which are specific for beta-1,2-glucans. Intriguingly, although some GH186 members work as classic glycoside hydrolases, others perform transglycosylation by wrapping the sugar chain around in the active-site, to position the 6-OH group of a terminal glucosyl unit for direct attack. Also notable, GH186 members appear to use an extended chain of water molecules to relay acceptor deprotonation by the general base residue, i.e. a Grotthuss mechanism. Check out the GH186 page to learn more about these interesting enzymes, and make sure to see the GH189, GH144, and GH162 pages from this same group.


2 May 2024: CBDs I to X... A major milestone! CBM families 1 to 10 are now complete! These are the old CBD (cellulose-binding domain) families, which used to have roman numerals as part of their nomenclature. A special thank you to all the authors and responsible curators who have contributed to this major milestone. Go have a peek at each of these old school families on their respective CAZypedia pages: CBM1, CBM2, CBM3, CBM4, CBM5, CBM6, CBM7, CBM8, CBM9, and CBM10.