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Difference between revisions of "Template:News"

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'''''Attention CAZymologists!'' Upcoming conference:'''
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'''19 July 2024:''' ''Chalk-up one more for the GTs!'' The '''[[Glycosyltransferase Family 47]]''' page joined the small group of [[Curator Approved]] [[Glycosyltransferase Families]] pages in ''CAZypedia'' today. This entry was [[author]]ed by Ph.D. students '''[[User:Daniel Tehrani|Daniel Tehrani]]''' and '''[[User:Charlie Corulli|Charlie Corulli]]''', and [[Responsible Curator|Curated]] by '''[[User:Breeanna Urbanowicz|Breeanna Urbanowicz]]''' with input from '''[https://ccrc.uga.edu/team/kelley-moremen/ Kelley Moremen]'''.  Widely represented in plants, '''[[GT47]]''' members are anomer-[[inverting]] [[glycosyltransferases]], which are involved in the biosynthesis of several cell wall matrix polysaccharides.  Representatives from mammals are involved in heparin biosynthesis.  Correspondingly, members of [[GH47]] have diverse substrate specificities, including the transfer of both anionic and neutral monosaccharides to polysaccharides.  ''This is a great example where two keen Ph.D. students worked with their supervisors to create a valuable page for the scientific community. We encourage others to follow their lead, on your favorite family!''
* [[File:Alamy 5.jpg|left|x50px|link=http://imb.savba.sk/~janecek/Alamys/Alamy_5/]] [http://imb.savba.sk/~janecek/Alamys/Alamy_5/ Fifth Symposium on the Alpha-Amylase Family - ALAMY_5], October 20-24, Smolenice Castle, Slovakia.
 
 
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'''19 September 2013:''' ''We are proud to announce the completion of ''CAZypedia's'' first Auxiliary Activity (AA) Family page!'' '''[[User:Paul Harris|Paul Harris]]''', one of the founding fathers of the family previously known as [[GH61]], has composed a lucid summary of the history and state-of-the-art of '''[[Auxiliary Activity Family 9]]'''. The revelation that these enzymes are actually copper-dependent ''lytic polysaccharide mono-oxygenases'' (LPMO), and not classic cellulases as originally thought, is one of the most exciting discoveries in enzymatic biomass degradation in recent years. ''Read more about this fascinating class of enzymes on the '''[[AA9]]''' page, and stay tuned for forthcoming page on the closely related '''[[AA10]]]''' family.
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'''9 July 2024:''' ''Yet another new family of beta-1,2-glucan-active enzymes!'' Today, '''[[User:Masahiro Nakajima|Masahiro Nakajima]]''' [[Curator Approved]] the '''[[Glycoside Hydrolase Family 186]]''' page by '''[[User:Sei Motouchi|Sei Motouchi]]'''. '''[[GH186]]''' is a family of anomer-[[inverting]] enzymes from bacteria, members of which are specific for beta-1,2-glucans.  Intriguingly, although some [[GH186]] members work as classic [[glycoside hydrolases]], others perform transglycosylation by wrapping the sugar chain around in the active-site, to position the 6-OH group of a terminal glucosyl unit for direct attack.  Also notable, [[GH186]] members appear to use an extended chain of water molecules to relay acceptor deprotonation by the [[general base]] residue, ''i.e.'' a [https://en.wikipedia.org/wiki/Grotthuss_mechanism Grotthuss mechanism]. ''Check out the '''[[GH186]]''' page to learn more about these interesting enzymes, and make sure to see the [[GH189]], [[GH144]], and [[GH162]] pages from this same group.''
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'''28 June 2013:''' ''CAZypedia'' was highlighted in a review article in ''Current Opinion in Structural Biology'' [http://dx.doi.org/10.1016/j.sbi.2013.06.001 available online today].  This review provides a succinct overview of some of the most exciting CAZyme structure-function studies in recent years, and we'd like to thank the authors, '''[[User:Shinya Fushinobu|Shinya Fushinobu]]''', Victor Alves, and '''[[User:Pedro Coutinho|Pedro Coutinho]]''', for showcasing ''CAZypedia'' as well!
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'''2 May 2024:''' ''CBDs I to X... A major milestone!'' '''CBM families 1 to 10 are now complete!''' These are the old CBD (cellulose-binding domain) families, which used to have roman numerals as part of their nomenclature. A special thank you to all the authors and responsible curators who have contributed to this major milestone. Go have a peek at each of these old school families on their respective ''CAZypedia'' pages: '''[[CBM1]], [[CBM2]], [[CBM3]], [[CBM4]], [[CBM5]], [[CBM6]], [[CBM7]], [[CBM8]], [[CBM9]], and [[CBM10]]'''.  
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'''23 June 2013:''' ''Yet another Lexicon page:'' With the help of '''[[User:Motomitsu Kitaoka|Motomitsu Kitaoka]]''', '''[[User:Spencer Williams|Spencer Williams]]''' updated the [[Lexicon]] page on '''[[Phosphorylases]]''' today to [[Curator Approved]] status, bringing the number of completed [[Lexicon]] pages to 20.  '''[[Phosphorylases]]''' catalyze glycosidic bond cleavage through nucleophilic substitution with phosphate (PO<sub>4</sub><sup>--</sup>), and play important roles in, for example, storage polysaccharide breakdown by generating glucose-1-phosphate as a precursor to glycolysis.  Notably, '''[[phosphorylases]]''' based on both [[Glycoside Hydrolase Families|glycoside hydrolase]] and [[Glycosyltransferase Families|glycosyltransferase]] protein folds are known.  ''Read more about this important class of carbohydrate-active enzymes '''[[Phosphorylases|here]]'''.
 
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'''22 May 2013:''' ''Our very first CBM page!:'' '''[[User:Elizabeth Ficko-Blean|Elizabeth Ficko-Blean]]''' and '''[[User:Al Boraston|Alisdair Boraston]]''' finalized ''CAZypedia's'' first [[Carbohydrate Binding Module Families|Carbohydrate Binding Module Family]] page, '''[[CBM32]]''', today.  This ushers in a new phase in ''CAZypedia's'' development, and we are looking forward to the continued evolution of this group of pages on these [[Carbohydrate-binding_modules|non-catalytic, substrate-binding, CAZyme-associated protein modules]].
 
 
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Latest revision as of 09:56, 22 July 2024

19 July 2024: Chalk-up one more for the GTs! The Glycosyltransferase Family 47 page joined the small group of Curator Approved Glycosyltransferase Families pages in CAZypedia today. This entry was authored by Ph.D. students Daniel Tehrani and Charlie Corulli, and Curated by Breeanna Urbanowicz with input from Kelley Moremen. Widely represented in plants, GT47 members are anomer-inverting glycosyltransferases, which are involved in the biosynthesis of several cell wall matrix polysaccharides. Representatives from mammals are involved in heparin biosynthesis. Correspondingly, members of GH47 have diverse substrate specificities, including the transfer of both anionic and neutral monosaccharides to polysaccharides. This is a great example where two keen Ph.D. students worked with their supervisors to create a valuable page for the scientific community. We encourage others to follow their lead, on your favorite family!


9 July 2024: Yet another new family of beta-1,2-glucan-active enzymes! Today, Masahiro Nakajima Curator Approved the Glycoside Hydrolase Family 186 page by Sei Motouchi. GH186 is a family of anomer-inverting enzymes from bacteria, members of which are specific for beta-1,2-glucans. Intriguingly, although some GH186 members work as classic glycoside hydrolases, others perform transglycosylation by wrapping the sugar chain around in the active-site, to position the 6-OH group of a terminal glucosyl unit for direct attack. Also notable, GH186 members appear to use an extended chain of water molecules to relay acceptor deprotonation by the general base residue, i.e. a Grotthuss mechanism. Check out the GH186 page to learn more about these interesting enzymes, and make sure to see the GH189, GH144, and GH162 pages from this same group.


2 May 2024: CBDs I to X... A major milestone! CBM families 1 to 10 are now complete! These are the old CBD (cellulose-binding domain) families, which used to have roman numerals as part of their nomenclature. A special thank you to all the authors and responsible curators who have contributed to this major milestone. Go have a peek at each of these old school families on their respective CAZypedia pages: CBM1, CBM2, CBM3, CBM4, CBM5, CBM6, CBM7, CBM8, CBM9, and CBM10.