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Difference between revisions of "Transglycosylases"
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== Overview == | == Overview == | ||
− | '''Transglycosylases''' are a class of GH enzymes that can catalyze the transformation of one glycoside to another. That is, these enzymes catalyze the interchange of an aglycon of a glycoside. Mechanistically, transglycosylases utilize the same mechanism as | + | '''Transglycosylases''' are a class of GH enzymes that can catalyze the transformation of one glycoside to another. That is, these enzymes catalyze the interchange of an aglycon of a glycoside. Mechanistically, transglycosylases utilize the same mechanism as various [[retaining]] glycoside hydrolases. Thus, reaction of the [[nucleophile]] of a retaining glycoside hydrolase with a substrate gives a glycosyl-enzyme [[intermediate]] that can be intercepted either by water to give the hydrolysis product, or by another acceptor (often another carbohydrate alcohol), to give a new glycoside or oligosaccharide <cite>Crout1998</cite>. Alternatively, transglycosylation can occur by substrate assisted catalysis, wherein a neighboring 2-acetamido group participates in the reaction to generate an [[oxazolinium]] ion intermediate, which can react with another acceptor other than water. Some transglycosidases possess substantial [[glycoside hydrolase]] activity, and some glycoside hydrolases possess transglycosylases activity. Indeed, in many cases it is unclear what the major role of an enzyme that possesses both activities may be. Transglycosylases are [[sequence-based classification|classified]] as [[glycoside hydrolases]] into various GH families on the basis of sequence similarity. |
Revision as of 02:33, 3 May 2013
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- Author: Spencer Williams
- Responsible Curator: Spencer Williams
Overview
Transglycosylases are a class of GH enzymes that can catalyze the transformation of one glycoside to another. That is, these enzymes catalyze the interchange of an aglycon of a glycoside. Mechanistically, transglycosylases utilize the same mechanism as various retaining glycoside hydrolases. Thus, reaction of the nucleophile of a retaining glycoside hydrolase with a substrate gives a glycosyl-enzyme intermediate that can be intercepted either by water to give the hydrolysis product, or by another acceptor (often another carbohydrate alcohol), to give a new glycoside or oligosaccharide [1]. Alternatively, transglycosylation can occur by substrate assisted catalysis, wherein a neighboring 2-acetamido group participates in the reaction to generate an oxazolinium ion intermediate, which can react with another acceptor other than water. Some transglycosidases possess substantial glycoside hydrolase activity, and some glycoside hydrolases possess transglycosylases activity. Indeed, in many cases it is unclear what the major role of an enzyme that possesses both activities may be. Transglycosylases are classified as glycoside hydrolases into various GH families on the basis of sequence similarity.
Families
GH families with notable transglycosylase activity include:
- GH2, for example LacZ β-galactosidase converts lactose to allolactose.
- GH13, for example cyclodextran glucanotransferases.
- GH16, for example xyloglucan endotransglycosylases.
- GH70, for example glucansucrases.
- GH77, for examples amylomaltase.
- GH23, GH102, GH103, and GH104 lytic transglycosylases.