User:Shinya Fushinobu

I am a Professor at Laboratory of Enzymology in Department of Biotechnology, Graduate School of Agricultural and Life Sciences, The University of Tokyo located in Tokyo, Japan. Raised in Kure, Hiroshima, Japan. I obtained Ph.D degree in Department of Biotechnology, Graduate School of Agricultural and Life Sciences, The University of Tokyo in 1999. My research interests concern structure and function of enzymes, mainly those of Carbohydrate-Active enZymes. My home page is here. I contributed to three-dimensional structure determination of

• GH1 Phanerochaete chrysosporium β-glucosidase 1B (BGL1B) [1]
• GH1 Metagenomic β-Glucosidase (Td2F2) [2]
• GH1 Bacillus sp. pyruvylated galactosidase (PvGal-ase) [3]
• GH3 Kluyveromyces marxianus β-glucosidase (KmBglI) [4]
• GH3 Aspergillus aculeatus β-glucosidase (AaBGL1) [5]
• GH5 Talaromyces trachyspermus β-mannanase (TtMan5A ) [6]
• GH8 Bacillus halodurans reducing-end xylose-releasing exo-oligoxylanase (Rex) [7]
• GH9 Photobacterium profundum exo-β-D-glucosaminidase (PpGlcNase) [8]
• GH10 Clostridium stercorarium xylanase B (XynB) [9]
• GH11 Aspergillus kawachii xylanase C (XynC) [10]
• GH13 Arthrobacter globiformis cyclic α-maltosyl-(1→6)-maltose hydrolase (CMMase) [11]
• GH18 Cordyceps militaris endo-β-N-acetylglucosaminidase (Endo-CoM) [12]
• GH20 Bifidobacterium bifidum lacto-N-biosidase (BbLNBase) [13]
• GH20 Bifidobacterium bifidum sulfoglycosidase (BbhII) [14]
• GH26 β-mannanase from a symbiotic protist of the termite Reticulitermes speratus (RsMan26C) [15]
• GH29 Bifidobacterium longum subsp. infantis 1,3-1,4-α-L-fucosidase (BiAfcB) [16]
• GH42 Thermus thermophilus β-galactosidase (A4-β-Gal) Family First [17]
• GH42 Bifidobacterium animalis subsp. lactis α-L-arabinopyranosidase (BlArap42B) [18]
• GH42 Bifidobacterium longum subsp. infantis β-galctosidase (BiBga42A) [19]
• GH45 Phanerochaete chrysosporium endoglucanase (PcCel45A) [20]
• GH51 Thermotoga maritima α-L-arabinofuranosidase (Tm-AFase) [21]
• GH54 Aspergillus kawachii α-L-arabinofuranosidase B (AkAbfB) Family First plus identification of CBM42 [22]
• GH55 Phanerochaete chrysosporium β-1,3-glucanase (Lam55A) Family First [23]
• GH57 Thermococcus litoralis 4-α-glucanotransferase (TLGT) Family First [24]
• GH65 Caldicellulosiruptor saccharolyticus kojibiose phosphorylase (CsKP) [25]
• GH65 Bacillus selenitireducens 2-O-α-glucosylglycerol phosphorylase (GGP) [26]
• GH79 Fusarium oxysporum 4-O-α-L-rhamnosyl-β-D-glucuronidase (FoBGlcA) [27]
• GH94 Vibrio proteolyticus chitobiose phosphorylase (ChBP) Family First [28]
• GH94 Cellvibrio gilvus cellobiose phosphorylase (CBP) [29]
• GH94 Saccharophagus degradans cellobionic acid phosphorylase (CABP) [30]
• GH94 Lachnoclostridium phytofermentans 1,2-β-oligoglucan phosphorylase (LpSOGP) [31]
• GH101 Bifidobacterium longum endo-α-N-acetylgalactosaminidase (EngBF) [32]
• GH112 Bifidobacterium longum galacto-N-biose/lacto-N-biose I phosphorylase (GLNBP) Family First [33]
• GH121 Bifidobacterium longum β-L-arabinobiosidase (HypBA2) Family First [34]
• GH127 Bifidobacterium longum β-L-arabinofuranosidase (HypBA1) Family First [35]
• GH129 Bifidobacterium bifidum α-N-acetylgalactosaminidase (NagBb) Family First [36]
• GH130 Listeria innocua β-1,2-mannobiose phosphorylase (Lin0857) [37]
• GH136 Bifidobacterium longum lacto-N-biosidase (LnbX) Family First [38]
• GH136 Eubacterium ramulus lacto-N-biosidase (ErLnb136) [39]
• GH136 Bifidobacterium saguini lacto-N-biosidase (BsaX) [40]
• GH136 Tyzzerella nexilis lacto-N-biosidase (TnX) [40]
• GH144 Chitinophaga pinensis endo-β-1,2-glucanase (Cpin_6279) Family First [41]
• GH172 Bifidobacterium dentium difructose dianhydride I synthase/hydrolase (αFFase1) Family First [42]
• PL20 Trichoderma reesei endo-β-1,4-glucuronan lyase (TrGL) Family First [43]
• PL42 Fusarium oxysporum L-rhamnose-α-1,4-D-glucuronate lyase (FoRham1) Family First [44]
• CBM28 in Clostridium josui Cel5A (CjCBM28) [45]

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6. Suzuki K, Michikawa M, Sato H, Yuki M, Kamino K, Ogasawara W, Fushinobu S, and Kaneko S. (2018) Purification, cloning, functional expression, structure, and characterization of a thermostable β-mannanase from Talaromyces trachyspermus B168 and its efficiency in production of mannooligosaccharides from coffee wastes. J. Appl. Glycosci. 65, 13-21. DOI: 10.5458/jag.jag.JAG-2017_018

19. Gotoh A, Hidaka M, Sakurama H, Nishimoto M, Kitaoka M, Sakanaka M, Fushinobu S, and Katayama T. (2023) Substrate recognition mode of a glycoside hydrolase family 42 β-galactosidase from Bifidobacterium longum subspecies infantis (BiBga42A) revealed by crystallographic and mutational analyses. Microbiome Res. Rep.2, 20. DOI: 10.20517/mrr.2023.14