CAZypedia needs your help!
We have many unassigned pages in need of Authors and Responsible Curators. See a page that's out-of-date and just needs a touch-up? - You are also welcome to become a CAZypedian. Here's how.
Scientists at all career stages, including students, are welcome to contribute.
Learn more about CAZypedia's misson here and in this article.
Totally new to the CAZy classification? Read this first.

Difference between revisions of "Help:References/More examples"

From CAZypedia
Jump to navigation Jump to search
Line 8: Line 8:
  
 
== Substrate specificities ==
 
== Substrate specificities ==
This is an example of how to make references to a journal article <cite>Comfort2007</cite>. Multiple references can go in the same place like this <cite>Comfort2007 He1999</cite>.  You can even cite books using just the ISBN <cite>StickWilliams2009</cite>.  References that are not in [http://www.ncbi.nlm.nih.gov/pubmed PubMed] or the [http://isbndb.com/ ISBNdb] can be typed in by hand <cite>Sinnott1990</cite> (note that the DOI link must be added by hand in this case).  This is an even more complicated example, where a comment field is used to add the chapter information for a book chapter <cite>Coutinho2009</cite>.  Internet URLs can sometimes also be effectively placed in the Reference list <cite>CAZyURL BayerLabCellulosomeSystemsPage</cite>.
+
This is an example of how to make references to a journal article <cite>Comfort2007</cite>. Multiple references can go in the same place like this <cite>Comfort2007 He1999</cite>.  You can even cite books using just the ISBN <cite>StickWilliams2009</cite>.  References that are not in [http://www.ncbi.nlm.nih.gov/pubmed PubMed] or the [http://isbndb.com/ ISBNdb] can be typed in by hand <cite>Sinnott1990</cite> (note that the DOI link must also be added by hand in this case).  This is an even more complicated example, where a comment field is used to add the chapter information for a book chapter <cite>Coutinho2009</cite>.  Internet URLs can sometimes also be effectively placed in the Reference list <cite>CAZyURL BayerLabCellulosomeSystemsPage</cite>.
  
 
There is essentially no limit to the number of references that can be cited in one place in the text <cite>Sinnott1990 Coutinho2009 He1999 StickWilliams2009 Comfort2007 CAZyURL BayerLabCellulosomeSystemsPage</cite>.
 
There is essentially no limit to the number of references that can be cited in one place in the text <cite>Sinnott1990 Coutinho2009 He1999 StickWilliams2009 Comfort2007 CAZyURL BayerLabCellulosomeSystemsPage</cite>.
  
 
Note that the references are automatically numbered based on the first appearance in the text, not the order they are listed in the "biblio" section <cite>Cantarel2009</cite>.
 
Note that the references are automatically numbered based on the first appearance in the text, not the order they are listed in the "biblio" section <cite>Cantarel2009</cite>.
 
  
 
== References ==
 
== References ==

Revision as of 01:10, 10 May 2011

This is a simplified CAZypedia page to demonstrate how in-text citations work. To see the wiki code used to make each of the citations/bibliographic references, view page source code by clicking the tab at the top right of the page.



Substrate specificities

This is an example of how to make references to a journal article [1]. Multiple references can go in the same place like this [1, 2]. You can even cite books using just the ISBN [3]. References that are not in PubMed or the ISBNdb can be typed in by hand [4] (note that the DOI link must also be added by hand in this case). This is an even more complicated example, where a comment field is used to add the chapter information for a book chapter [5]. Internet URLs can sometimes also be effectively placed in the Reference list [6, 7].

There is essentially no limit to the number of references that can be cited in one place in the text [1, 2, 3, 4, 5, 6, 7].

Note that the references are automatically numbered based on the first appearance in the text, not the order they are listed in the "biblio" section [8].

References

  1. Comfort DA, Bobrov KS, Ivanen DR, Shabalin KA, Harris JM, Kulminskaya AA, Brumer H, and Kelly RM. (2007). Biochemical analysis of Thermotoga maritima GH36 alpha-galactosidase (TmGalA) confirms the mechanistic commonality of clan GH-D glycoside hydrolases. Biochemistry. 2007;46(11):3319-30. DOI:10.1021/bi061521n | PubMed ID:17323919 [Comfort2007]
  2. He S and Withers SG. (1997). Assignment of sweet almond beta-glucosidase as a family 1 glycosidase and identification of its active site nucleophile. J Biol Chem. 1997;272(40):24864-7. DOI:10.1074/jbc.272.40.24864 | PubMed ID:9312086 [He1999]
  3. [StickWilliams2009]
  4. Sinnott, M.L. (1990) Catalytic mechanisms of enzymic glycosyl transfer. Chem. Rev. 90, 1171-1202. DOI: 10.1021/cr00105a006

    [Sinnott1990]
  5. Claus-Wilhelm von der Lieth, Thomas Luetteke, and Martin Frank. (2010-01-19) Bioinformatics for Glycobiology and Glycomics: An Introduction. Wiley. [Coutinho2009]

    Chapter 5: Coutinho PM, Rancurel C, Stam M, Bernard T, Couto FM, Danchin EGJ, Henrissat B. "Carbohydrate-active Enzymes Database: Principles and Classification of Glycosyltransferases."

  6. Carbohydrate Active Enzymes database; URL http://www.cazy.org/

    [CAZyURL]
  7. [BayerLabCellulosomeSystemsPage]
  8. Cantarel BL, Coutinho PM, Rancurel C, Bernard T, Lombard V, and Henrissat B. (2009). The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics. Nucleic Acids Res. 2009;37(Database issue):D233-8. DOI:10.1093/nar/gkn663 | PubMed ID:18838391 [Cantarel2009]

All Medline abstracts: PubMed