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Difference between revisions of "Glycoside Hydrolase Family 7"
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== Substrate specificities == | == Substrate specificities == | ||
Most [[glycoside hydrolases]] of family 7 cleave β-1,4 glycosidic bonds in cellulose/β-1,4-glucans. Several members also show activity on xylan. The substrate specificities found in GH7 are: ''[[endo]]''-1,4-β-glucanase (EC 3.2.1.4), [reducing end-acting] cellobiohydrolase (EC 3.2.1.-), chitosanase (EC 3.2.1.132) and ''[[endo]]''-1,3-1,4-β-glucanase (EC 3.2.1.73). | Most [[glycoside hydrolases]] of family 7 cleave β-1,4 glycosidic bonds in cellulose/β-1,4-glucans. Several members also show activity on xylan. The substrate specificities found in GH7 are: ''[[endo]]''-1,4-β-glucanase (EC 3.2.1.4), [reducing end-acting] cellobiohydrolase (EC 3.2.1.-), chitosanase (EC 3.2.1.132) and ''[[endo]]''-1,3-1,4-β-glucanase (EC 3.2.1.73). | ||
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== Kinetics and Mechanism == | == Kinetics and Mechanism == | ||
− | Family 7 enzymes are [[retaining]] enzymes, as first shown by NMR <cite>Knowles1988</cite> on Cellobiohydrolase I | + | Family 7 enzymes are [[retaining]] enzymes, as first shown by NMR <cite>Knowles1988</cite> on Cellobiohydrolase I (CBH I; Cel7A) from the fungus ''Trichoderma reesei'' (a clonal derivative of ''Hypocrea jecorina''). |
== Catalytic Residues == | == Catalytic Residues == |
Revision as of 14:01, 24 February 2010
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- Author: ^^^Jerry Stahlberg^^^
- Responsible Curator: ^^^Jerry Stahlberg^^^
Glycoside Hydrolase Family 7 | |
Clan | GH-B |
Mechanism | retaining |
Active site residues | known |
CAZy DB link | |
http://www.cazy.org/fam/GH7.html |
Substrate specificities
Most glycoside hydrolases of family 7 cleave β-1,4 glycosidic bonds in cellulose/β-1,4-glucans. Several members also show activity on xylan. The substrate specificities found in GH7 are: endo-1,4-β-glucanase (EC 3.2.1.4), [reducing end-acting] cellobiohydrolase (EC 3.2.1.-), chitosanase (EC 3.2.1.132) and endo-1,3-1,4-β-glucanase (EC 3.2.1.73).
Kinetics and Mechanism
Family 7 enzymes are retaining enzymes, as first shown by NMR [1] on Cellobiohydrolase I (CBH I; Cel7A) from the fungus Trichoderma reesei (a clonal derivative of Hypocrea jecorina).
Catalytic Residues
Content is to be added here.
Three-dimensional structures
Content is to be added here.
Family Firsts
- First sterochemistry determination
- Hypocrea jecorina cellobiohydrolase Cel7A by NMR [1].
- First catalytic nucleophile identification
- Cite some reference here, with a short (1-2 sentence) explanation [2].
- First general acid/base residue identification
- Cite some reference here, with a short (1-2 sentence) explanation [3].
- First 3-D structure
- First cellobiohydrolase was Hypocrea jecorina Cel7A (CBH I; PDB 1cel) [4]. First endo-1,4-β-glucanase was Endoglucanase I (EG I, Cel7B) from Fusarium oxysporum (PDB 1byh) [5], both by X-ray crystallography.
References
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Jonathan K. C. Knowles, J.K.C., Lehtovaara, P., Murray, M. and Sinnott, M.L. (1988) Stereochemical course of the action of the cellobioside hydrolases I and II of Trichoderma reesei. J. Chem. Soc., Chem. Commun., 1988, 1401-1402. DOI: 10.1039/C39880001401
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Sinnott, M.L. (1990) Catalytic mechanisms of enzymic glycosyl transfer. Chem. Rev. 90, 1171-1202. DOI: 10.1021/cr00105a006
- He S and Withers SG. (1997). Assignment of sweet almond beta-glucosidase as a family 1 glycosidase and identification of its active site nucleophile. J Biol Chem. 1997;272(40):24864-7. DOI:10.1074/jbc.272.40.24864 |
- Divne C, Ståhlberg J, Reinikainen T, Ruohonen L, Pettersson G, Knowles JK, Teeri TT, and Jones TA. (1994). The three-dimensional crystal structure of the catalytic core of cellobiohydrolase I from Trichoderma reesei. Science. 1994;265(5171):524-8. DOI:10.1126/science.8036495 |
- Sulzenbacher G, Driguez H, Henrissat B, Schülein M, and Davies GJ. (1996). Structure of the Fusarium oxysporum endoglucanase I with a nonhydrolyzable substrate analogue: substrate distortion gives rise to the preferred axial orientation for the leaving group. Biochemistry. 1996;35(48):15280-7. DOI:10.1021/bi961946h |