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Difference between revisions of "User:Wade Abbott"
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'''Glycoside Hydrolases''' | '''Glycoside Hydrolases''' | ||
| + | *[[GH20]] ''Streptococcus pneumoniae'' exo-β-D-N-acetylglucosaminidase (SpnGH20/StrH)<cite>Pluvinage2013</cite>. ''Streptococcus pneumoniae'' exo-β-D-N-acetylglucosaminidase (SpnGH20/StrH). <cite>Pluvinage2011</cite> | ||
| + | |||
*[[GH28]] ''Yersinia enterocolitica'' Exopolygalacturonase (YeGH28)<cite>Abbott2007a</cite> | *[[GH28]] ''Yersinia enterocolitica'' Exopolygalacturonase (YeGH28)<cite>Abbott2007a</cite> | ||
| + | |||
| + | *[[GH85]] ''Streptococcus pneumoniae'' Endo-beta-D-glucosaminidase D (SpGH85/EndoD)<cite>Abbott2009a</cite> | ||
'''Polysaccharide Lyases''' | '''Polysaccharide Lyases''' | ||
| + | *[[PL2]] ''Yersinia enterocolitica'' Perplasmic pectate lyase (YePL2A)<cite>Abbott2007c</cite>. ''Paenibacillus sp. Y412MC10'' Cytoplasmic endolytic pectate lyase (PaePL2)<cite>Abbott2013</cite>. | ||
| + | *[[PL22]] ''Yersinia enterocolitica'' Cytoplasmic oligogalacturonate lyase (YePL22/Ogl)<cite>Abbott2010a</cite> | ||
'''Carbohydrate Binding Modules''' | '''Carbohydrate Binding Modules''' | ||
| − | *[[CBM32]] ''Yersinia enterocolitica'' Polygalacturonic acid binding protein (YeCBM32)<cite>Abbott2007b</cite> | + | *[[CBM6]] Predicting CBM6 function <cite>Abbott2009b</cite> |
| + | *[[CBM32]] ''Yersinia enterocolitica'' Polygalacturonic acid binding protein (YeCBM32)<cite>Abbott2007b</cite>. Predicting CBM32 function <cite>Abbott2008a</cite>. ''Streptococcus pneumoniae'' EndoD CBM (SpnCBM32)<cite>Abbott2011</cite>. | ||
| + | *[[CBM35]] Predicting CBM35 function <cite>Correia2010</cite> | ||
| + | *[[CBM51]] ''Clostridium perfringens'' Blood group binding CBMs (GH95CBM51 and GH98CBM51)<cite>Abbott2007b</cite>. Predicting CBM51 function <cite>Finn2008</cite> | ||
| + | '''Carbohydrate Esterases''' | ||
| + | *[[CE8]] ''Yersinia enterocolitica'' Pectin methylesterase <cite>Abbott2012</cite> | ||
<biblio> | <biblio> | ||
#Abbott2007a pmid=17397864 | #Abbott2007a pmid=17397864 | ||
#Abbott2007b pmid=17292916 | #Abbott2007b pmid=17292916 | ||
| + | #Abbott2007c pmid=17881361 | ||
| + | |||
| + | #Abbott2008a pmid=18032406 | ||
| + | |||
| + | |||
| + | #Finn2008 pmid=18292090 | ||
| + | |||
| + | #Abbott2009a pmid=19181667 | ||
| + | |||
| + | #Abbott2009b pmid=19181667 | ||
| + | |||
| + | |||
| + | #Abbott2010a pmid= | ||
| + | 20851883 | ||
| + | |||
| + | #Correia2010 pmid= | ||
| + | 20496884 | ||
| + | #Abbott2011 pmid= | ||
| + | 21505233 | ||
| + | #Pluvinage2011 pmid= | ||
| + | 22078560 | ||
| + | |||
| + | #Abbott2012 pmid= | ||
| + | 22297983 | ||
| + | |||
| + | #Pluvinage2013 pmid= | ||
| + | 23154168 | ||
| + | #Abbott2013 pmid= | ||
| + | 24013861 | ||
| + | |||
[[Category:Contributors|Abbott, Wade]] | [[Category:Contributors|Abbott, Wade]] | ||
Revision as of 13:07, 23 September 2013
Dr. Abbott received his PhD from the University of Victoria in 2005. He then studied the molecular basis of protein-carbohydrate interactions under Dr. ^^^Alisdair Boraston^^^ at the University of Victoria. In 2008, Dr. Abbott joined Dr. ^^^Harry Gilbert^^^ at the Complex Carbohydrate Research Centre, at the University of Georgia where he investigated the functional genomics of carbohydrate utilization pathways from intestinal bacteria. Currently, Dr. Abbott is a Research Scientist for Agriculture and Agri-Food Canada based at the Lethbridge Research Centre and Adjunct Professor at the University of Lethbridge. His research program investigates the mechanisms of complex carbohydrate modification by intestinal bacteria, and is developing applications for carbohydrates in animal agriculture and human intestinal health.
Glycoside Hydrolases
- GH20 Streptococcus pneumoniae exo-β-D-N-acetylglucosaminidase (SpnGH20/StrH)[1]. Streptococcus pneumoniae exo-β-D-N-acetylglucosaminidase (SpnGH20/StrH). [2]
Polysaccharide Lyases
- PL2 Yersinia enterocolitica Perplasmic pectate lyase (YePL2A)[5]. Paenibacillus sp. Y412MC10 Cytoplasmic endolytic pectate lyase (PaePL2)[6].
Carbohydrate Binding Modules
- CBM6 Predicting CBM6 function [8]
- CBM32 Yersinia enterocolitica Polygalacturonic acid binding protein (YeCBM32)[9]. Predicting CBM32 function [10]. Streptococcus pneumoniae EndoD CBM (SpnCBM32)[11].
- CBM35 Predicting CBM35 function [12]
- CBM51 Clostridium perfringens Blood group binding CBMs (GH95CBM51 and GH98CBM51)[9]. Predicting CBM51 function [13]
Carbohydrate Esterases
<biblio>
- Abbott2007a pmid=17397864
- Abbott2007b pmid=17292916
- Abbott2007c pmid=17881361
- Abbott2008a pmid=18032406
- Finn2008 pmid=18292090
- Abbott2009a pmid=19181667
- Abbott2009b pmid=19181667
- Abbott2010a pmid=
20851883
- Correia2010 pmid=
20496884
- Abbott2011 pmid=
21505233
- Pluvinage2011 pmid=
22078560
- Abbott2012 pmid=
22297983
- Pluvinage2013 pmid=
23154168
- Abbott2013 pmid=
24013861