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Auxiliary Activity Family 5

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This page is currently under construction. This means that the Responsible Curator has deemed that the page's content is not quite up to CAZypedia's standards for full public consumption. All information should be considered to be under revision and may be subject to major changes.


Auxiliary Activity Family AA5
Fold Seven-bladed β-propeller
Mechanism Copper Radical Oxidase
Active site residues known
CAZy DB link
https://www.cazy.org/AA5.html


Substrate specificities

Content is to be added here.

Authors may get an idea of what to put in each field from Curator Approved Auxiliary Activity Families and Glycoside Hydrolase Families. (TIP: Right click with your mouse and open this link in a new browser window...)

In the meantime, please see these references for an essential introduction to the CAZy classification system: [1, 2].

Kinetics and Mechanism

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Catalytic Residues

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Three-dimensional structures

AA5 share a seven-bladed β-propeller fold [3, 4, 5] as the catalytic domain containing the active site. 

Family Firsts

First stereochemistry determination
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First catalytic nucleophile identification
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First general acid/base residue identification
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First 3-D structure
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References

  1. Davies, G.J. and Sinnott, M.L. (2008) Sorting the diverse: the sequence-based classifications of carbohydrate-active enzymes. The Biochemist, vol. 30, no. 4., pp. 26-32. Download PDF version.

    [DaviesSinnott2008]
  2. pmid= 26680532

    [Yin2015]
  3. pmid= 8557673

    [Whittaker1996]
  4. pmid= 12797833

    [Whittaker2003]
  5. Andberg M, Mollerup F, Parikka K, Koutaniemi S, Boer H, Juvonen M, Master E, Tenkanen M, and Kruus K. (2017). A Novel Colletotrichum graminicola Raffinose Oxidase in the AA5 Family. Appl Environ Microbiol. 2017;83(20). DOI:10.1128/AEM.01383-17 | PubMed ID:28778886 [Andberg2017]
  6. pmid= 30885320

    [Oide2019]
  7. Mathieu, Y., Offen, W. A., Forget, S. M., Ciano, L., Viborg, A. H., Blagova, E., Henrissat, B., Walton, P.H, Davies, G.J, and Brumer, H. (2020). Discovery of a fungal copper radical oxidase with high catalytic efficiency toward 5-hydroxymethylfurfural and benzyl alcohols for bioprocessing. ACS Catalysis, 10(5), 3042-3058. https://pubs.acs.org/doi/abs/10.1021/acscatal.9b04727

    [Mathieu2020]
  8. pmid= 3553159

    [Kersten1987]
  9. Ögel, Z. B.; Brayford, D.; McPherson, M. J., (1994). Cellulose-triggered sporulation in the galactose oxidase-producing fungus Cladobotryum (Dactylium) dendroides NRRL 2903 and its re-identification as a species of Fusarium. Mycol. Res., 98 (4), 474-480. https://doi.org/10.1016/j.pep.2014.12.010

    [Ogel1994]
  10. pmid= 13641238

    [Cooper1959]
  11. pmid= 14012475

    [Amaral1963]
  12. Cleveland M, Lafond M, Xia FR, Chung R, Mulyk P, Hein JE, and Brumer H. (2021). Two Fusarium copper radical oxidases with high activity on aryl alcohols. Biotechnol Biofuels. 2021;14(1):138. DOI:10.1186/s13068-021-01984-0 | PubMed ID:34134727 [Cleveland2021a]
  13. PMID=24967652

    [Paukner2014]
  14. PMID=25543085

    [Paukner2015]
  15. PMID=31177409#Cantarel2009 pmid=18838391

    [Faria2019]

All Medline abstracts: PubMed