User:Shinya Fushinobu

I am a Professor at Laboratory of Enzymology in Department of Biotechnology, Graduate School of Agricultural and Life Sciences, The University of Tokyo located in Tokyo, Japan. Raised in Kure, Hiroshima, Japan. I obtained Ph.D degree in Department of Biotechnology, Graduate School of Agricultural and Life Sciences, The University of Tokyo in 1999. My research interests concern structure and function of enzymes, mainly those of Carbohydrate-Active enZymes. My home page is here. I contributed to three-dimensional structure determination of

• GH1 Phanerochaete chrysosporium β-glucosidase 1B (BGL1B) [1]
• GH3 Kluyveromyces marxianus β-glucosidase (KmBglI) [2]
• GH3 Aspergillus aculeatus β-glucosidase (AaBGL1) [3]
• GH8 Bacillus halodurans reducing-end xylose-releasing exo-oligoxylanase (Rex) [4]
• GH10 Clostridium stercorarium xylanase B (XynB) [5]
• GH11 Aspergillus kawachii xylanase C (XynC) [6]
• GH20 Bifidobacterium bifidum lacto-N-biosidase (BbLNBase) [7]
• GH26 β-mannanase from a symbiotic protist of the termite Reticulitermes speratus (RsMan26C) [8]
• GH29 Bifidobacterium longum subsp. infantis 1,3-1,4-α-L-fucosidase (BiAfcB) [9]
• GH42 Thermus thermophilus β-galactosidase (A4-β-Gal) Family First [10]
• GH51 Thermotoga maritima α-L-arabinofuranosidase (Tm-AFase) [11]
• GH54 Aspergillus kawachii α-L-arabinofuranosidase B (AkAbfB) Family First plus identification of CBM42 [12]
• GH55 Phanerochaete chrysosporium β-1,3-glucanase (Lam55A) Family First [13]
• GH57 Thermococcus litoralis 4-α-glucanotransferase (TLGT) Family First [14]
• GH65 Caldicellulosiruptor saccharolyticus kojibiose phosphorylase (CsKP) [15]
• GH94 Vibrio proteolyticus chitobiose phosphorylase (ChBP) Family First [16]
• GH94 Cellvibrio gilvus cellobiose phosphorylase (CBP) [17]
• GH101 Bifidobacterium longum endo-α-N-acetylgalactosaminidase (EngBF) [18]
• GH112 Bifidobacterium longum galacto-N-biose/lacto-N-biose I phosphorylase (GLNBP) Family First [19]
• GH127 Bifidobacterium longum β-L-arabinofuranosidase (HypBA1) Family First [20]

• PL20 Trichoderma reesei endo-β-1,4-glucuronan lyase (TrGL) Family First [21]
• CBM28 in Clostridium josui Cel5A (CjCBM28) [22]

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12. Miyanaga A, Koseki T, Matsuzawa H, Wakagi T, Shoun H, and Fushinobu S. (2004). Crystal structure of a family 54 alpha-L-arabinofuranosidase reveals a novel carbohydrate-binding module that can bind arabinose. J Biol Chem. 2004;279(43):44907-14. DOI:10.1074/jbc.M405390200 |
14. Imamura H, Fushinobu S, Yamamoto M, Kumasaka T, Jeon BS, Wakagi T, and Matsuzawa H. (2003). Crystal structures of 4-alpha-glucanotransferase from Thermococcus litoralis and its complex with an inhibitor. J Biol Chem. 2003;278(21):19378-86. DOI:10.1074/jbc.M213134200 |
20. Ito T, Saikawa K, Kim S, Fujita K, Ishiwata A, Kaeothip S, Arakawa T, Wakagi T, Beckham GT, Ito Y, and Fushinobu S. (2014). Crystal structure of glycoside hydrolase family 127 β-l-arabinofuranosidase from Bifidobacterium longum. Biochem Biophys Res Commun. 2014;447(1):32-7. DOI:10.1016/j.bbrc.2014.03.096 |