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Difference between revisions of "Carbohydrate Binding Module Families"
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<blockquote class="toccolours" style="float:none; padding: 10px 15px 10px 15px; display:table;"> | <blockquote class="toccolours" style="float:none; padding: 10px 15px 10px 15px; display:table;"> | ||
''Note (May 2013): We just beginning to develop individual CBM pages in CAZypedia at this point, although a long-term goal is to have complete coverage of all of the [http://www.cazy.org/Carbohydrate-Binding-Modules.html CBM families represented in the CAZy database]. This effort is being led by ^^^Alicia Lammerts van Bueren^^^, together with the [[Board of Curators|Senior Curators]]. If you would like to become involved in the development of the CBM pages, please contact ^^^Alicia Lammerts van Bueren^^^ directly, or using [[Special:Contact|this form]].''</blockquote> | ''Note (May 2013): We just beginning to develop individual CBM pages in CAZypedia at this point, although a long-term goal is to have complete coverage of all of the [http://www.cazy.org/Carbohydrate-Binding-Modules.html CBM families represented in the CAZy database]. This effort is being led by ^^^Alicia Lammerts van Bueren^^^, together with the [[Board of Curators|Senior Curators]]. If you would like to become involved in the development of the CBM pages, please contact ^^^Alicia Lammerts van Bueren^^^ directly, or using [[Special:Contact|this form]].''</blockquote> | ||
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+ | <blockquote class="toccolours" style="float:none; padding: 10px 15px 10px 15px; display:table;"> | ||
+ | ''Jump to:'' [[#Curator Approved|Curator Approved CBM pages]] | [[#Under construction|CBM pages under construction]] | [[#Unassigned pages|Unassigned CBM pages]] | [[#Deleted families|CBM families deleted from CAZy]] | ||
+ | </blockquote> | ||
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== Curator Approved == | == Curator Approved == | ||
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== Under construction == | == Under construction == | ||
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+ | == Unassigned pages == | ||
+ | <blockquote class="toccolours" style="float:none; padding: 10px 15px 10px 15px; display:table;"> | ||
+ | [[File:Blank user-200px.png|left|40px]]The following [[:Category:Unassigned pages|Unassigned pages]] are currently lacking a [[Responsible Curator]] and one or more [[Author]]s. If you are an expert on any of these families and would like to help us improve ''CAZypedia'' by getting involved with the production and maintenance of the corresponding page(s), please contact a member of the [[Board of Curators]] directly, or via [[Special:Contact|this form]]. | ||
+ | </blockquote> | ||
+ | {{#dpl: | ||
+ | |category=Carbohydrate Binding Module Families | ||
+ | |category=Unassigned pages | ||
+ | |resultsheader=\nThere are currently %PAGES% Carbohydrate Binding Module Family pages in ''CAZypedia'' that have not been assigned to a [[Responsible Curator]].\n | ||
+ | |columns=3 | ||
+ | |rowcolformat=width=100% | ||
+ | |ordermethod=sortkey | ||
+ | |order=ascending | ||
+ | |allowcachedresults=no | ||
+ | }} | ||
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+ | |||
+ | == Deleted families == | ||
+ | <blockquote class="toccolours" style="float:none; padding: 10px 15px 10px 15px; display:table;"> | ||
+ | [[File:Nuvola_apps_important.png|left|40px]]The following families have been deleted from the CAZy database. Please see the individual ''CAZypedia'' pages and links to the corresponding CAZy DB pages for specific explanations. | ||
+ | </blockquote> | ||
+ | {{#dpl: | ||
+ | |category=Carbohydrate Binding Module Families | ||
+ | |category=Deleted families | ||
+ | |resultsheader=\nThere are currently %PAGES% pages in ''CAZypedia'' that describe Carbohydrate Binding Module families deleted from the CAZy DB.\n | ||
+ | |columns=3 | ||
+ | |rowcolformat=width=100% | ||
+ | |ordermethod=sortkey | ||
+ | |order=ascending | ||
+ | |allowcachedresults=no | ||
+ | }} | ||
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Revision as of 10:14, 20 September 2013
This pages lists all the Carbohydrate Binding Module (CBM) Family pages in CAZypedia that have been given Curator Approved status, as well as those that are currently under construction.
The Lexicon entry Carbohydrate-binding modules contains an introduction and overview of these non-catalytic, accessory modules, which are often found in train with other CAZyme modules, e.g. Glycoside Hydrolases and Polysaccharide Lyases [1, 2, 3, 4, 5]. The classification of CBMs mirrors that of the CAZy database [6].
Note (May 2013): We just beginning to develop individual CBM pages in CAZypedia at this point, although a long-term goal is to have complete coverage of all of the CBM families represented in the CAZy database. This effort is being led by ^^^Alicia Lammerts van Bueren^^^, together with the Senior Curators. If you would like to become involved in the development of the CBM pages, please contact ^^^Alicia Lammerts van Bueren^^^ directly, or using this form.
Jump to: Curator Approved CBM pages | CBM pages under construction | Unassigned CBM pages | CBM families deleted from CAZy
Curator Approved
These pages have been approved by the Responsible Curator as essentially complete. CAZypedia is a living document, so further improvement of these pages is still possible; please see the individual pages for more information.
There are currently 63 Curator approved Carbohydrate Binding Module Family pages in CAZypedia.
- Carbohydrate Binding Module Family 1
- Carbohydrate Binding Module Family 2
- Carbohydrate Binding Module Family 3
- Carbohydrate Binding Module Family 4
- Carbohydrate Binding Module Family 5
- Carbohydrate Binding Module Family 6
- Carbohydrate Binding Module Family 7
- Carbohydrate Binding Module Family 8
- Carbohydrate Binding Module Family 9
- Carbohydrate Binding Module Family 10
- Carbohydrate Binding Module Family 14
- Carbohydrate Binding Module Family 15
- Carbohydrate Binding Module Family 16
- Carbohydrate Binding Module Family 19
- Carbohydrate Binding Module Family 20
- Carbohydrate Binding Module Family 21
- Carbohydrate Binding Module Family 22
- Carbohydrate Binding Module Family 28
- Carbohydrate Binding Module Family 29
- Carbohydrate Binding Module Family 32
- Carbohydrate Binding Module Family 33
- Carbohydrate Binding Module Family 35
- Carbohydrate Binding Module Family 41
- Carbohydrate Binding Module Family 42
- Carbohydrate Binding Module Family 44
- Carbohydrate Binding Module Family 46
- Carbohydrate Binding Module Family 47
- Carbohydrate Binding Module Family 48
- Carbohydrate Binding Module Family 49
- Carbohydrate Binding Module Family 50
- Carbohydrate Binding Module Family 55
- Carbohydrate Binding Module Family 58
- Carbohydrate Binding Module Family 60
- Carbohydrate Binding Module Family 62
- Carbohydrate Binding Module Family 63
- Carbohydrate Binding Module Family 65
- Carbohydrate Binding Module Family 66
- Carbohydrate Binding Module Family 67
- Carbohydrate Binding Module Family 71
- Carbohydrate Binding Module Family 73
- Carbohydrate Binding Module Family 75
- Carbohydrate Binding Module Family 76
- Carbohydrate Binding Module Family 77
- Carbohydrate Binding Module Family 78
- Carbohydrate Binding Module Family 79
- Carbohydrate Binding Module Family 80
- Carbohydrate Binding Module Family 81
- Carbohydrate Binding Module Family 82
- Carbohydrate Binding Module Family 83
- Carbohydrate Binding Module Family 86
- Carbohydrate Binding Module Family 87
- Carbohydrate Binding Module Family 89
- Carbohydrate Binding Module Family 92
- Carbohydrate Binding Module Family 94
- Carbohydrate Binding Module Family 96
- Carbohydrate Binding Module Family 99
- Carbohydrate Binding Module Family 100
- Carbohydrate Binding Module Family 101
- Carbohydrate Binding Module Family 102
- Carbohydrate Binding Module Family 103
- Carbohydrate Binding Module Family 105
- Carbohydrate Binding Module Family 106
- Carbohydrate Binding Module Family 70
Under construction
These pages are currently under construction in CAZypedia. As such, the Responsible Curator has deemed that the page's content is not quite up to CAZypedia's standards for full public consumption. All information on these pages should therefore be considered to be under revision and may be subject to major changes.
There are currently 8 Carbohydrate Binding Module Family pages Under construction in CAZypedia.
- Carbohydrate Binding Module Family 11
- Carbohydrate Binding Module Family 13
- Carbohydrate Binding Module Family 18
- Carbohydrate Binding Module Family 61
- Carbohydrate Binding Module Family 64
- Carbohydrate Binding Module Family 74
- Carbohydrate Binding Module Family 85
- Carbohydrate Binding Module Family 91
Unassigned pages
The following Unassigned pages are currently lacking a Responsible Curator and one or more Authors. If you are an expert on any of these families and would like to help us improve CAZypedia by getting involved with the production and maintenance of the corresponding page(s), please contact a member of the Board of Curators directly, or via this form.
Deleted families
The following families have been deleted from the CAZy database. Please see the individual CAZypedia pages and links to the corresponding CAZy DB pages for specific explanations.
There are currently 2 pages in CAZypedia that describe Carbohydrate Binding Module families deleted from the CAZy DB.
References
- Boraston AB, Bolam DN, Gilbert HJ, and Davies GJ. (2004). Carbohydrate-binding modules: fine-tuning polysaccharide recognition. Biochem J. 2004;382(Pt 3):769-81. DOI:10.1042/BJ20040892 |
- Shoseyov O, Shani Z, and Levy I. (2006). Carbohydrate binding modules: biochemical properties and novel applications. Microbiol Mol Biol Rev. 2006;70(2):283-95. DOI:10.1128/MMBR.00028-05 |
- Hashimoto H (2006). Recent structural studies of carbohydrate-binding modules. Cell Mol Life Sci. 2006;63(24):2954-67. DOI:10.1007/s00018-006-6195-3 |
- Guillén D, Sánchez S, and Rodríguez-Sanoja R. (2010). Carbohydrate-binding domains: multiplicity of biological roles. Appl Microbiol Biotechnol. 2010;85(5):1241-9. DOI:10.1007/s00253-009-2331-y |
- Ficko-Blean E and Boraston AB. (2012). Insights into the recognition of the human glycome by microbial carbohydrate-binding modules. Curr Opin Struct Biol. 2012;22(5):570-7. DOI:10.1016/j.sbi.2012.07.009 |
- Cantarel BL, Coutinho PM, Rancurel C, Bernard T, Lombard V, and Henrissat B. (2009). The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics. Nucleic Acids Res. 2009;37(Database issue):D233-8. DOI:10.1093/nar/gkn663 |